 |
Citation:
Aguirre-Gamboa R, Gomez-Rueda H, Martínez-Ledesma E, Martínez-Torteya A, Chacolla-Huaringa R, Alberto Rodriguez-Barrientos, José G. Tamez-Peña, Victor Treviño (2013) SurvExpress: An Online Biomarker Validation Tool and Database for Cancer Gene Expression Data Using Survival Analysis.
PLoS ONE 8(9): e74250. doi:10.1371/journal.pone.0074250
PMID: 24066126 SurvExpress Tutorial
Funding: ITESM grant CAT220, CONACyT grants 83929 and 140601.
Design by Leopoldo Cuéllar + Jesús Abrego |
|
| SurvExpress |
*** New: Link to tutorial restored (at top, sept/25/2020) ***
*** New and faster gene search (since jan/23/2015) ***
Interface v2.0, Database Update = Jan 20, 2021 7:12:55 AM
Tissues = 26, Datasets = 225, Samples = 39325
*** WARNING ***
Dear SurvExpress user,
The database access for SurvExpress has been lost since Oct/2019 and currently out of funds. We are using our free time to help fixing this issue but unfortunately, we don´t have a final date.
We would appreciate if you want to help us filling out this form Thanks!
Databases that have been restored (2020):
(785) ACC-TCGA July 2016 Adrenocortical carcinoma
(786) BLCA-TCGA-Bladder Urothelial Carcinoma-July 2016
(787) BRCA-TCGA Breast invasive carcinoma - July 2016
(789) CESC-TCGA Cervical squamous cell carcinoma and endocervical adenocarcinoma July 2016
(791) CHOL-TCGA Cholangiocarcinoma July 2016
(790) CLLE-ES - ICGC Chronic Lymphocytic Leukemia - IgVH +/- June 2016
(792) COAD - TCGA - Colon adenocarcinoma - June 2016
(793) COADREAD - TCGA Colon and Rectum adenocarcinoma June 2016
(794) DBLC - TCGA - Lymphoid Neoplasm Diffuse Large B-cell Lymphoma June 2016
(795) ESCA - TCGA Esophageal carcinoma June 2016
(796) GBM - TCGA - Glioblastoma June 2016
(797) GBMLGG - TCGA Gliomas - June 2016
(798) HNSC - TCGA Head and Neck squamous cell carcinoma June 2016
(799) KIPAN - TCGA Kidney PAN cancer TCGA June 2016
(800) KIRC - TCGA - Kidney renal clear cell carcinoma
(801) KIRP - TCGA Kidney renal papillary cell carcinoma June 2016
(802) LAML - TCGA - Acute Myeloid Leukemia June 2016
(803) LGG - TCGA - Low Grade Gliomas - June 2016
(804) LIHC - TCGA - Liver hepatocellular carcinoma June 2016
(805) LUAD - TCGA - Lung adenocarcinoma June 2016
(806) LUSC - TCGA - Lung squamous cell carcinoma June 2016
(807) MALY-DE - ICGC - Malignant Lymphoma - Germinal center B-cell derived lymphomas June 2016
(808) NBL-US - ICGC - Pediatric Solid Tumor - Neuroblastoma June 2016
(809) OV - TCGA - Ovarian serous cystadenocarcinoma June 2016
(810) OV-AU - ICGC Ovarian Cancer - Serous cystadenocarcinoma - June 2016
(811) PAAD - TCGA - Pancreatic adenocarcinoma
(812) PACA-AU - ICGC - Pancreatic Cancer - Ductal adenocarcinoma - June 2016
(813) PAEN-AU - ICGC -Pancreatic Cancer - Endocrine neoplasms - June 2016
(814) PCPG - TCGA - Pheochromocytoma and Paraganglioma - June 2016
(815) PRAD - TCGA - Prostate adenocarcinoma June 2016
(816) READ - TCGA Rectum adenocarcinoma June 2016
(817) RECA-AU ICGC Renal cell carcinoma June 2016
(818) SARC - TCGA Sarcoma June 2016
(788) SKCM-TCGA Skin Cutaneous Melanoma July 2016
(819) STAD - TCGA - Stomach adenocarcinoma June 2016
(820) STES - TCGA - Stomach and Esophagous adenocarcinoma
(821) TGCT - TCGA - Testicular Germ Cell Tumors
(822) THCA - TCGA - Thyroid carcinoma - June 2016
(823) THYM - TCGA - Thymoma June 2016
(824) UCEC - TCGA - Uterine Corpus Endometrial Carcinoma June 2016
(825) UCS - TCGA - Uterine Carcinosarcoma June 2016
(826) UVM - TCGA - Uveal Melanoma June 2016
( 71) Boer Poustka Renal Kidney GSE3
( 87) Bergmann Poustka Gastrointestinal GSE112 GPL10
( 84) Bergmann Poustka Gastrointestinal GSE112 GPL9
( 83) Hoshida Golub Liver GSE10186
( 89) Rao Giddings Esophagus GSE11595
( 82) Tsuchiya Rusyn Liver GSE17856
( 90) Peters C.Fitzgerald Esophagus GSE19417
( 73) Wuttig Wirth Renal Kidney GSE22541
( 72) Heaton Hammer Renal Kidney GSE33371
( 88) Pasini Chammas Gastrointestinal GSE38749
(409) Galsky Oh - Prostate - GSE45705
( 74) Hoshida Golub Liver GSE10143
( 14) Zhu Tsao Lung GSE14814
(130) Wilkerson Lung GSE17710
( 12) Tomida Lung Cancer Survival GSE4716
( 65) Tomida Lung GSE13213
( 30) TCGA_Squamous_Lung_Survival
(154) Tang Xiao Lung GSE42127
( 13) Lee Son Lung GSE8894
(392) Rousseaux-Khochbin-Lung-GSE30219_GSE30219-completo
( 10) Raponi Beer Lung GSE4573
( 11) Bild Nevins Lung GSE3141
( 5) Larsen Lung GSE5123
(150) Lung Meta-base: 6 cohorts 22K genes
( 17) Hou2chips-completo_DSK_17_GSE19188.txt
(131) Okayama Kohno Lung GSE31210
(115) Chitale_Adenocarcinoma-completo_DSK_115.txt
( 16) Chen Lung GSE4882
(391) Botling GSE37745
( 75) Bhattacharjee Lung
(139) Roepman-completo.txt
( 70) Zhao Renal Kidney GSE3538
(382) Smith Beauchamp Lu Colon GSE17537
(383) Loboda Yeatman Colon GSE28722
(384) Reid Pierotti Colon GSE16125 GPL5175
(385) Thorsteinsson Olsen Colon GSE31595
(394) Sheffer-Domany-Colon-GSE41258
(395) Sveen-Agesen-Colon-GSE24551-GPL5175
(396) Sveen-Skotheim-Colon-GSE24549-GPL5175
(397) Sveen-Skotheim-Colon-GSE24549-GPL11028
(398) Sveen-Agesen-Colon-GSE24551-GPL11028
(400) van´t Veer - Van De Vijver Nature 2002
(409) Galsky Oh - Prostate - GSE45705
(410) Gulzar-Prostate-GSE40272
|
| Important Notes |
Given the high demand that occasionally hang the server and the scarce computational and human resources in our lab, this service will be reset each day around 04:00am CST (CST=[UTC/GMT]-6 hours, no summer correction) lasting about one minute. |
| (1) Genes: |
Tutorial |
| (2) Tissue: |
|
| (3) Database: |
Select a tissue
|
| (4) Options: |
|
| (5) Send: |
|
